First note that file transfer client is not generic line ending conversion tool. So generally, it only converts the line ending between native formats of source and destination machine. And you do not seem to have the source file in native format of your local machine (Windows).
Anyway, assuming your server supports SFTP version 3, not higher, what is common, you can force WinSCP to convert the file to CRLF using raw session setting
https://winscp.net/eng/docs/rawsettings
Anyway, assuming your server supports SFTP version 3, not higher, what is common, you can force WinSCP to convert the file to CRLF using raw session setting
EOLType
:
https://winscp.net/eng/docs/rawsettings