It turned out that WinSCP indeed does not follow RTL status of the language since 5.8. I do not remember rationale behind that anymore. Possibly because the functionality was not tested for years and the languages that use it are not complete anyway.
Though if you want to try to force the RTL, run WinSCP once like this:
Though if you want to try to force the RTL, run WinSCP once like this:
WinSCP.exe /rawconfig Interface\BidiModeOverride=2 Interface\FlipChildrenOverride=2